Venue/Offline Mode Workshop

From Sample to Insight: A Hands-on NGS and RNA-Seq Workshop 2023

Transcriptomics- Data Analysis
1st - 3rd November 2023
Chennai, Tamil Nadu
Registrations Closed
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Date

1st - 3rd November 2023

Location

Chennai, Tamil Nadu

Category

Workshop

Event Type

Venue/Offline Mode

Organiser

Sathyabama Institute of Science and Technology

About Event

The purpose of this workshop is to get an understanding of Next-Generation Sequencing (NGS) and gain practical experience in RNA Sequencing data analysis. You will be trained to understand NGS data formats and handle potential problems/errors. The course layout has been adapted to beginners' needs in the NGS data analysis field. It allows anyone with no or little background in computer science to get a first hands-on experience in this new and fast-evolving research topic.

Events

Day 01: Intro-lecture on NGS and Data analysis,
Hands-on command line usage in Linux,
Intro to RNA-seq and Workflow,
FASTA, FASTQ, and GTF - formats,
Tool installation and usage, Data QC,
Data preprocessing.

Day 02: RNA alignment concepts and file formats (SAM, BAM, and BED),
Alignment vs Assembly vs K-mer approaches,
RNA-seq Alignment Visualization with IGV Quantification,
Data Normalization and DEG Analysis.

Day 03: DEG Visualization,
DEG Pathway Analysis.

Who Can Attend:

Agricultural BioTechnology BioMedical

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From Sample to Insight: A Hands-on NGS and RNA-Seq Workshop 2023 Workshop Poster

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